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In a comparable way to oligo-/polypeptides, oligonucleotides-/oligoydeoxynucleotides have standard fragmentation patterns in the negative ion mode based upon charge separation in individual phosphodiester links These fragmentations give rise to simple fragments corresponding to the situation where fragmentation in the phosphodiester link between the nth and (n + 1)th nucleotide/deoxynucleotide residues creates de ned 5 -fragment ions or 3 -fragment ions (Figure 916) These fragment ions are readily seen in sequence in MALDI mass spectrometry, allowing the oligonucleotide-/oligodeoxynucleotide residue sequences to be determined from the mass differences between consecutive, sequential fragment ion peaks Typically, the molecular ion [M H] is most abundant, followed by fragment ions Of course, sequence analysis is potentially much enhanced by MALDI tandem mass spectrometry again, in the same way that polypeptide and protein sequencing is also much enhanced using product ion scanning.

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Alternatively, ladder sequencing can be done in an equivalent manner to peptide ladder sequencing (see Section 931) using exonuclease enzymes to selectively hydrolyse the phosphodiester link nearest the 5 - or 3 -terminus However, this is laborious In the event, neither product ion scanning nor ladder sequencing compete very well with gel- or capillary-electrophoresis-based ddNTP approaches to sequencing (see 3) Although the sensitivity and ef cacy of MALDI mass spectrometry is not as high as that of gel-based approaches, mass spectrometry does allow identi cation of nucleic acid changes more speci cally Indeed, the main application of mass spectrometry of nucleic acids is in the identi cation of single-nucleotide polymorphisms (SNPs), using mass spectrometry as a platform for genomic studies Single-nucleotide polymorphisms are single-base variations in.

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CHAPTER 2 Light as Waves that we will make over and over again. Nevertheless, as holography takes on new and different forms, there are likely to be times when we have to worry about measuring beams based on fundamental principles. For example, we have ignored the effect of exposure angle on the necessary dose for a holographic material-this is acceptably accurate for typical angles, but might require reexamination if one is talking about edge-lit holograms that involve very large beam angles.

Figure 7.8 Schematic (traditional) model of humic acid. Included in the structure are molecular remnants of amino acids and sugars, showing possible associations with inorganic compounds including silica (Si-O) moieties at the surface of clay and other minerals. See text for details and an alternative model. (From Lengeler, J.W., G. Drews, and H.G. Schlegel. 1999. Biology of Prokaryotes, g. 31.11. Blackwell Science, Stuttgart. With permission from Blackwell Science, Stuttgart.)

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6. Click Next. The Specify Fields screen appears, as shown in Figure 4-36. 7. Select fields in the left side of the dialog and then click Move to transfer them to the Layout fields list on the right. When you ve finished, click Next. (Note that instead of selecting a field and clicking Move, you can also simply doubleclick the field you want to move.)

3. Check Scale Attributes to reapply the object s attributes after the transformation. 4. Check Constrain Proportions to preserve the object s aspect ratio. 5. To scale an object proportionately: a. Choose Scale from the Option list. b. Enter a new percentage value in either the height or width text boxes.

Banner ads are a practical and popular application of the animated GIF. When creating banner ads in Fireworks, keep these things in mind: Standard sizes exist for banner ads. Before you create a banner ad, make sure that you ve selected the correct size so that your banner ad can be used on the widest variety of Web sites. Many Web sites have upper limits on the file sizes accepted. Generally, banner ads should be under 12K. Use motion blur to cut out frames without slowing down the action. In the next chapter, you look at customizing Fireworks.

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